Using BioJava from R

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I’m a fan of literate programming. When I’m writing a paper, I typically use LaTeX to draft the paper, Java to generate the data, and R to create figures and do basic analysis. With Sweave (or the... Read More

Java Interpreters

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I’m a big fan of the iPython interpreter. I like having an interpreter running while I develop for prototyping and debugging. Since I currently develop in java primarily, I thought I’d tak... Read More